IsoFunc updates

01 Jan 2016
IsoFunc v1.0

miRmine

miRmine: Human miRNA expression database.

MI-PVT

MI-PVT: The Michigan Proteome Visualization Tool.

GuanLab Tools

MIsoMine: A data portal of expression, function and network of splice isoforms in the Mouse.
IsoPred: Functional annotation of Mouse gene isoforms.
IsoformNetwork: Isoform level functional relationship network for the Mouse.
stageSpecificNetwork: Dynamic functional relationship networks for Ex vivo Human erythroid differentiation.

IsoFunc

=== If you are using this tool, please cite: Panwar et al (2016) Genome-Wide Functional Annotation of Human Protein-Coding Splice Variants Using Multiple Instance Learning. Journal of proteome research 15(6):1747-53 ===
The IsoFunc is a tool for assigning function to the Human Protein-Coding Splice Variants (PCSVs). Most of previous studies have been focused only on the gene-centric functional annotation but now evidence is accumulating that different splice variants from a single Human gene can function differently. Therefore, there is an need to do the functional annotation at transcript-level and assign function to the Human protein-coding splice variants. The IsoFunc is a freely available tool for the global scientific community.
Help
ENTER your query here:     

Transcript-level Expression: High Low All
Ensembl-based protein-coding biotype: Known Novel Putative All
PCSVs should be present in neXtProt: Yes Doesn't matter


Examples:

Download: If you wanna download all fold change values from IsoFunc, please click here: IsoFunc.zip (size 244MB)
Contact: If you have any query regarding IsoFunc please write to Dr. Yuanfang Guan (gyuanfan@umich.edu) or Dr. Bharat Panwar (bharatpa@umich.edu).